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GOT1 glutamic-oxaloacetic transaminase 1 [ Charadrius vociferus (killdeer) ]

Gene ID: 104288814, updated on 12-Mar-2024

Summary

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Gene symbol
GOT1
Gene description
glutamic-oxaloacetic transaminase 1
Locus tag
N301_11546
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See GOT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009648965.1 (35117..43074)

NW_009648965.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 28 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 1 Neighboring gene Hermansky-Pudlak syndrome 1 protein homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009648965.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-aspartate:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aspartate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartate aminotransferase, cytoplasmic
Names
Aspartate aminotransferase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009648965.1 Reference ASM70802v2

    Range
    35117..43074
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009887686.1 → XP_009885988.1  aspartate aminotransferase, cytoplasmic

    UniProtKB/TrEMBL
    A0A0A0AN79
    Conserved Domains (2) summary
    pfam00155
    Location:63 → 428
    Aminotran_1_2; Aminotransferase class I and II
    cl18945
    Location:63 → 436
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
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