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GBX2 gastrulation brain homeobox 2 [ Charadrius vociferus (killdeer) ]

Gene ID: 104288727, updated on 12-Mar-2024

Summary

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Gene symbol
GBX2
Gene description
gastrulation brain homeobox 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See GBX2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009648960.1 (570630..578041, complement)

NW_009648960.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily M member 8 Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 Neighboring gene ankyrin repeat and SOCS box containing 18 Neighboring gene IQ motif containing with AAA domain 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009648960.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein GBX-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009648960.1 Reference ASM70802v2

    Range
    570630..578041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009887581.1 → XP_009885883.1  homeobox protein GBX-2

    Conserved Domains (2) summary
    COG5576
    Location:57 → 175
    COG5576; Homeodomain-containing transcription factor [Transcription]
    pfam00046
    Location:89 → 142
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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