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PDE1A phosphodiesterase 1A [ Charadrius vociferus (killdeer) ]

Gene ID: 104286971, updated on 12-Mar-2024

Summary

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Gene symbol
PDE1A
Gene description
phosphodiesterase 1A
Locus tag
N301_07842
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009648453.1 (1575659..1746955, complement)

NW_009648453.1Genomic Context describing neighboring genes Neighboring gene ITPR interacting domain containing 2 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 1C

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009648453.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-nucleotide phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A
Names
Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009648453.1 Reference ASM70802v2

    Range
    1575659..1746955 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009885619.1 → XP_009883921.1  calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A

    UniProtKB/TrEMBL
    A0A0A0ALA6
    Conserved Domains (2) summary
    pfam00233
    Location:219 → 440
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
    pfam08499
    Location:78 → 134
    PDEase_I_N; 3'5'-cyclic nucleotide phosphodiesterase N-terminal
Nucleotide Protein
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