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FIP1L1 factor interacting with PAPOLA and CPSF1 [ Charadrius vociferus (killdeer) ]

Gene ID: 104286389, updated on 11-Apr-2024

Summary

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Gene symbol
FIP1L1
Gene description
factor interacting with PAPOLA and CPSF1
Locus tag
N301_01914
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See FIP1L1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009648333.1 (4632448..4676220)

NW_009648333.1Genomic Context describing neighboring genes Neighboring gene RAS like family 11 member B Neighboring gene sec1 family domain containing 2 Neighboring gene ligand of numb-protein X 1 Neighboring gene cysteine rich hydrophobic domain 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009648333.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1
Names
Pre-mRNA 3'-end-processing factor FIP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009648333.1 Reference ASM70802v2

    Range
    4632448..4676220
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009884978.1 → XP_009883280.1  LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1

    UniProtKB/TrEMBL
    A0A0A0AJN4
    Conserved Domains (1) summary
    pfam05182
    Location:108 → 150
    Fip1; Fip1 motif
Nucleotide Protein
Heading Accession and Version

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