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SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [ Charadrius vociferus (killdeer) ]

Gene ID: 104284834, updated on 12-Mar-2024

Summary

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Gene symbol
SMARCD1
Gene description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
Locus tag
N301_12902
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009647940.1 (593776..606236, complement)

NW_009647940.1Genomic Context describing neighboring genes Neighboring gene ceramide synthase 5 Neighboring gene glycerol-3-phosphate dehydrogenase 1 Neighboring gene acid sensing ion channel subunit 1 Neighboring gene Rac GTPase activating protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009647940.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SWI/SNF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009647940.1 Reference ASM70802v2

    Range
    593776..606236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009883207.1 → XP_009881509.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

    UniProtKB/TrEMBL
    A0A0A0AEC4
    Conserved Domains (2) summary
    smart00151
    Location:268 → 344
    SWIB; SWI complex, BAF60b domains
    COG5531
    Location:184 → 385
    Rsc6; Chromatin remodeling complex protein RSC6, contains SWIB domain [Chromatin structure and dynamics]
Nucleotide Protein
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