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DCAF5 DDB1 and CUL4 associated factor 5 [ Apaloderma vittatum (bar-tailed trogon) ]

Gene ID: 104278301, updated on 12-Mar-2024

Summary

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Gene symbol
DCAF5
Gene description
DDB1 and CUL4 associated factor 5
Locus tag
N311_04866
Gene type
protein coding
RefSeq status
MODEL
Organism
Apaloderma vittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Trogoniformes; Trogonidae; Apaloderma
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009731553.1 (29270..91956, complement)

NW_009731553.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009731553.1 Unplaced Scaffold Reference ASM70340v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul4-RING E3 ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DDB1- and CUL4-associated factor 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70340v1

Genomic

  1. NW_009731553.1 Reference ASM70340v1

    Range
    29270..91956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009875230.1 → XP_009873532.1  DDB1- and CUL4-associated factor 5 isoform X2

    UniProtKB/TrEMBL
    A0A091PJM5
    Conserved Domains (3) summary
    COG2319
    Location:18 → 280
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:22 → 58
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:13 → 317
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_009875229.1 → XP_009873531.1  DDB1- and CUL4-associated factor 5 isoform X1

    UniProtKB/TrEMBL
    A0A091PJM5
    Conserved Domains (3) summary
    COG2319
    Location:18 → 280
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:22 → 58
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:13 → 317
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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