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SDC2 syndecan 2 [ Gavia stellata (red-throated loon) ]

Gene ID: 104262478, updated on 12-Mar-2024

Summary

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Gene symbol
SDC2
Gene description
syndecan 2
Locus tag
N328_12992
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Gaviiformes; Gaviidae; Gavia
Also known as
Syndecan-2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 3 NC_082596.1 (25723486..25784440, complement)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009324961.1 (47076..58884)

Chromosome 3 - NC_082596.1Genomic Context describing neighboring genes Neighboring gene metadherin Neighboring gene carboxypeptidase Q Neighboring gene phosphatidylserine synthase 1 Neighboring gene cytochrome b-c1 complex subunit 7 Neighboring gene mitochondrial transcription termination factor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syndecan-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082596.1 Reference bGavSte3.hap2

    Range
    25723486..25784440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059815350.1 → XP_059671333.1  syndecan-2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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