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POLR2J RNA polymerase II subunit J [ Gavia stellata (red-throated loon) ]

Gene ID: 104260928, updated on 12-Mar-2024

Summary

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Gene symbol
POLR2J
Gene description
RNA polymerase II subunit J
Locus tag
N328_10762
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 25
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 25 NC_082618.1 (5447278..5448855, complement)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009319182.1 (100..1022)

Chromosome 25 - NC_082618.1Genomic Context describing neighboring genes Neighboring gene alkB homolog 4, lysine demethylase Neighboring gene leucine rich repeats and WD repeat domain containing 1 Neighboring gene ras GTPase-activating protein 4-like Neighboring gene uroplakin-3b-like protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II, core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase II subunit RPB11-a
Names
polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082618.1 Reference bGavSte3.hap2

    Range
    5447278..5448855 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059829454.1 → XP_059685437.1  DNA-directed RNA polymerase II subunit RPB11-a isoform X2

  2. XM_059829453.1 → XP_059685436.1  DNA-directed RNA polymerase II subunit RPB11-a isoform X1

Nucleotide Protein
Heading Accession and Version

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