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PTPN4 protein tyrosine phosphatase non-receptor type 4 [ Gavia stellata (red-throated loon) ]

Gene ID: 104258693, updated on 12-Mar-2024

Summary

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Gene symbol
PTPN4
Gene description
protein tyrosine phosphatase non-receptor type 4
Locus tag
N328_03599
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 8 NC_082601.1 (14815669..14928548, complement)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009309547.1 (559..59425)

Chromosome 8 - NC_082601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132317398 Neighboring gene erythrocyte membrane protein band 4.1 like 5 Neighboring gene transmembrane protein 177 Neighboring gene muscle RAS oncogene homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein phosphatase non-receptor type 4
Names
Tyrosine-protein phosphatase non-receptor type 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082601.1 Reference bGavSte3.hap2

    Range
    14815669..14928548 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059820076.1 → XP_059676059.1  tyrosine-protein phosphatase non-receptor type 4

Nucleotide Protein
Heading Accession and Version

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