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UBLCP1 ubiquitin like domain containing CTD phosphatase 1 [ Gavia stellata (red-throated loon) ]

Gene ID: 104255068, updated on 12-Mar-2024

Summary

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Gene symbol
UBLCP1
Gene description
ubiquitin like domain containing CTD phosphatase 1
Locus tag
N328_08429
Gene type
protein coding
RefSeq status
MODEL
Organism
Gavia stellata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Gaviiformes; Gaviidae; Gavia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current bGavSte3.hap2 (GCF_030936135.1) 16 NC_082609.1 (10015060..10028130)
100 previous assembly ASM69087v1 (GCF_000690875.1) Unplaced Scaffold NW_009294834.1 (2214..12644)

Chromosome 16 - NC_082609.1Genomic Context describing neighboring genes Neighboring gene EBF transcription factor 1 Neighboring gene ring finger protein 145 Neighboring gene serine protease inhibitor Kazal-type 6 Neighboring gene ovomucoid-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-like domain-containing CTD phosphatase 1
Names
Ubiquitin-like domain-containing CTD phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030936135.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGavSte3.hap2

Genomic

  1. NC_082609.1 Reference bGavSte3.hap2

    Range
    10015060..10028130
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059825348.1 → XP_059681331.1  ubiquitin-like domain-containing CTD phosphatase 1

    UniProtKB/TrEMBL
    A0A093F1J0

  2. XM_059825347.1 → XP_059681330.1  ubiquitin-like domain-containing CTD phosphatase 1

    UniProtKB/TrEMBL
    A0A093F1J0
Nucleotide Protein
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