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THUMPD2 THUMP domain containing 2 [ Cariama cristata (Red-legged seriema) ]

Gene ID: 104160898, updated on 12-Mar-2024

Summary

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Gene symbol
THUMPD2
Gene description
THUMP domain containing 2
Locus tag
N322_04446
Gene type
protein coding
RefSeq status
MODEL
Organism
Cariama cristata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Cariamiformes; Cariamidae; Cariama
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See THUMPD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM69053v1 (GCF_000690535.1) Unplaced Scaffold NW_009613745.1 (5..10287)

NW_009613745.1Genomic Context describing neighboring genes Neighboring gene mal, T cell differentiation protein Neighboring gene mitochondrial ribosomal protein S5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009613745.1 Unplaced Scaffold Reference ASM69053v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA (guanine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THUMP domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cariama cristata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69053v1

Genomic

  1. NW_009613745.1 Reference ASM69053v1

    Range
    5..10287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009699146.1 → XP_009697448.1  THUMP domain-containing protein 2

    UniProtKB/TrEMBL
    A0A091LZ97
    Conserved Domains (2) summary
    smart00981
    Location:137 → 197
    THUMP; The THUMP domain is named after after thiouridine synthases, methylases and PSUSs
    cl17173
    Location:207 → 347
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

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