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PRTG protogenin [ Struthio camelus australis ]

Gene ID: 104148421, updated on 12-Mar-2024

Summary

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Gene symbol
PRTG
Gene description
protogenin
Locus tag
N308_02764
See related
Ensembl:ENSSCUG00000014384
Gene type
protein coding
RefSeq status
MODEL
Organism
Struthio camelus australis (sub-species: australis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio
Orthologs
human mouse all
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Genomic context

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See PRTG in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current ASM69896v1 (GCF_000698965.1) Unplaced Scaffold NW_009271683.1 (12972829..13056418, complement)

NW_009271683.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 4 Neighboring gene pygopus family PHD finger 1 Neighboring gene NEDD4 E3 ubiquitin protein ligase Neighboring gene regulatory factor X7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009271683.1 Unplaced Scaffold Reference ASM69896v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protogenin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Struthio camelus australis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69896v1 Primary Assembly

Genomic

  1. NW_009271683.1 Reference ASM69896v1 Primary Assembly

    Range
    12972829..13056418 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009681615.1 → XP_009679910.1  protogenin

    UniProtKB/TrEMBL
    A0A093I0D6
    Related
    ENSSCUP00000019537.1, ENSSCUT00000025835.1
    Conserved Domains (5) summary
    smart00408
    Location:339 → 396
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:330 → 412
    IG_like; Immunoglobulin like
    cd00063
    Location:910 → 1000
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:416 → 501
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:129 → 219
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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