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LRWD1 leucine rich repeats and WD repeat domain containing 1 [ Struthio camelus australis ]

Gene ID: 104146177, updated on 12-Mar-2024

Summary

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Gene symbol
LRWD1
Gene description
leucine rich repeats and WD repeat domain containing 1
Locus tag
N308_15202
See related
Ensembl:ENSSCUG00000010983
Gene type
protein coding
RefSeq status
MODEL
Organism
Struthio camelus australis (sub-species: australis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio
Orthologs
human mouse all
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Genomic context

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See LRWD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM69896v1 (GCF_000698965.1) Unplaced Scaffold NW_009271464.1 (191264..207139, complement)

NW_009271464.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104146176 Neighboring gene deltex E3 ubiquitin ligase 2 Neighboring gene ras GTPase-activating protein 4-like Neighboring gene alkB homolog 4, lysine demethylase Neighboring gene ORAI calcium release-activated calcium modulator 2 Neighboring gene PRKR interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009271464.1 Unplaced Scaffold Reference ASM69896v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of protein localization to chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear origin of replication recognition complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat and WD repeat-containing protein 1
Names
Leucine-rich repeat and WD repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Struthio camelus australis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69896v1 Primary Assembly

Genomic

  1. NW_009271464.1 Reference ASM69896v1 Primary Assembly

    Range
    191264..207139 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009678102.1 → XP_009676397.1  leucine-rich repeat and WD repeat-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A093HTZ9
    Conserved Domains (4) summary
    COG2319
    Location:364 → 713
    WD40; WD40 repeat [General function prediction only]
    pfam12799
    Location:33 → 63
    LRR_4; Leucine Rich repeats (2 copies)
    sd00039
    Location:401 → 447
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:365 → 603
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_009678101.1 → XP_009676396.1  leucine-rich repeat and WD repeat-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A093HTZ9
    Related
    ENSSCUP00000014915.1, ENSSCUT00000019605.1
    Conserved Domains (6) summary
    COG2319
    Location:402 → 751
    WD40; WD40 repeat [General function prediction only]
    sd00031
    Location:23 → 48
    LRR_1; leucine-rich repeat [structural motif]
    pfam12799
    Location:48 → 89
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:27 → 81
    LRR_8; Leucine rich repeat
    sd00039
    Location:439 → 485
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:403 → 641
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_009678103.1 → XP_009676398.1  leucine-rich repeat and WD repeat-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A093HTZ9
    Conserved Domains (3) summary
    COG2319
    Location:290 → 639
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:327 → 373
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:291 → 529
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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