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HACD4 3-hydroxyacyl-CoA dehydratase 4 [ Struthio camelus australis ]

Gene ID: 104145482, updated on 12-Mar-2024

Summary

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Gene symbol
HACD4
Gene description
3-hydroxyacyl-CoA dehydratase 4
Locus tag
N308_02297
See related
Ensembl:ENSSCUG00000009101
Gene type
protein coding
RefSeq status
MODEL
Organism
Struthio camelus australis (sub-species: australis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM69896v1 (GCF_000698965.1) Unplaced Scaffold NW_009271348.1 (1199812..1217625, complement)

NW_009271348.1Genomic Context describing neighboring genes Neighboring gene MLLT3 super elongation complex subunit Neighboring gene focadhesin Neighboring gene interferon beta 1 Neighboring gene DMRT like family A1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009271348.1 Unplaced Scaffold Reference ASM69896v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4
Names
Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Struthio camelus australis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69896v1 Primary Assembly

Genomic

  1. NW_009271348.1 Reference ASM69896v1 Primary Assembly

    Range
    1199812..1217625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009677019.1 → XP_009675314.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X2

    UniProtKB/TrEMBL
    A0A093JV41
    Related
    ENSSCUP00000012427.1, ENSSCUT00000016285.1
    Conserved Domains (1) summary
    pfam04387
    Location:50 → 209
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  2. XM_009677020.1 → XP_009675315.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X3

    Conserved Domains (1) summary
    cl02156
    Location:50 → 194
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  3. XM_009677018.1 → XP_009675313.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X1

    UniProtKB/TrEMBL
    A0A093JV41
    Related
    ENSSCUP00000012425.1, ENSSCUT00000016283.1
    Conserved Domains (1) summary
    pfam04387
    Location:50 → 253
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
Nucleotide Protein
Heading Accession and Version

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