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BCL11A BCL11 transcription factor A [ Struthio camelus australis ]

Gene ID: 104143442, updated on 12-Mar-2024

Summary

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Gene symbol
BCL11A
Gene description
BCL11 transcription factor A
Gene type
protein coding
RefSeq status
MODEL
Organism
Struthio camelus australis (sub-species: australis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Struthioniformes; Struthionidae; Struthio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM69896v1 (GCF_000698965.1) Unplaced Scaffold NW_009271075.1 (3479956..3557842, complement)

NW_009271075.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 85A Neighboring gene VRK serine/threonine kinase 2 Neighboring gene FA complementation group L Neighboring gene uncharacterized LOC104143443 Neighboring gene poly(A) polymerase gamma

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009271075.1 Unplaced Scaffold Reference ASM69896v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of dendrite development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: B-cell lymphoma/leukemia 11A
Names
B cell CLL/lymphoma 11A
BAF chromatin remodeling complex subunit BCL11A
BCL11A, BAF complex component

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Struthio camelus australis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69896v1 Primary Assembly

Genomic

  1. NW_009271075.1 Reference ASM69896v1 Primary Assembly

    Range
    3479956..3557842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009673933.1 → XP_009672228.1  LOW QUALITY PROTEIN: B-cell lymphoma/leukemia 11A

    Conserved Domains (4) summary
    cd11674
    Location:85 → 159
    lambda-1; inner capsid protein lambda-1 or VP3
    sd00017
    Location:701 → 721
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:700 → 721
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:713 → 738
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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