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ATP6V0A4 ATPase H+ transporting V0 subunit a4 [ Egretta garzetta (little egret) ]

Gene ID: 104135570, updated on 12-Mar-2024

Summary

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Gene symbol
ATP6V0A4
Gene description
ATPase H+ transporting V0 subunit a4
Locus tag
Z169_07633
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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See ATP6V0A4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009258756.1 (1166445..1191656, complement)

NW_009258756.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 24 Neighboring gene SVOP like Neighboring gene transmembrane protein 213 Neighboring gene KIAA1549 ortholog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009258756 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar acidification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase 116 kDa subunit a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009258756.1 Reference ASM68718v1 Primary Assembly

    Range
    1166445..1191656 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009649236.2 → XP_009647531.1  V-type proton ATPase 116 kDa subunit a isoform X2

    UniProtKB/TrEMBL
    A0A091IVC1
    Conserved Domains (2) summary
    COG1269
    Location:28 → 835
    NtpI; Archaeal/vacuolar-type H+-ATPase subunit I/STV1 [Energy production and conversion]
    pfam01496
    Location:28 → 834
    V_ATPase_I; V-type ATPase 116kDa subunit family

  2. XM_035888948.1 → XP_035744841.1  V-type proton ATPase 116 kDa subunit a isoform X1

    UniProtKB/TrEMBL
    A0A091IVC1
    Conserved Domains (1) summary
    pfam01496
    Location:27 → 789
    V_ATPase_I; V-type ATPase 116kDa subunit family
Nucleotide Protein
Heading Accession and Version

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