U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRIOBP TRIO and F-actin binding protein [ Egretta garzetta (little egret) ]

Gene ID: 104134220, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TRIOBP
Gene description
TRIO and F-actin binding protein
Locus tag
Z169_12022
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009258549.1 (2541077..2554976)

NW_009258549.1Genomic Context describing neighboring genes Neighboring gene arf-GAP with dual PH domain-containing protein 1 Neighboring gene nucleolar protein 12 Neighboring gene TRIO and F-actin-binding protein-like Neighboring gene histone H5 Neighboring gene glycine C-acetyltransferase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_009258549 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: TRIO and F-actin-binding protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009258549.1 Reference ASM68718v1 Primary Assembly

    Range
    2541077..2554976
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035903206.1 → XP_035759099.1  LOW QUALITY PROTEIN: TRIO and F-actin-binding protein

    UniProtKB/TrEMBL
    A0A091JEP6
    Conserved Domains (2) summary
    cd13275
    Location:58 → 159
    PH_M-RIP; Myosin phosphatase-RhoA Interacting Protein Pleckstrin homology (PH) domain
    TIGR02168
    Location:345 → 643
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.