U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PTP4A1 protein tyrosine phosphatase 4A1 [ Egretta garzetta (little egret) ]

Gene ID: 104127399, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PTP4A1
Gene description
protein tyrosine phosphatase 4A1
Locus tag
Z169_12562
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259863.1 (3431754..3438924, complement)

NW_009259863.1Genomic Context describing neighboring genes Neighboring gene eyes shut homolog Neighboring gene PHD finger protein 3 Neighboring gene lengsin, lens protein with glutamine synthetase domain Neighboring gene uncharacterized LOC118452420

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_009259863 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein tyrosine phosphatase type IVA 1
Names
Protein tyrosine phosphatase type IVA 1
protein tyrosine phosphatase type IVA, member 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259863.1 Reference ASM68718v1 Primary Assembly

    Range
    3431754..3438924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009640066.2 → XP_009638361.1  protein tyrosine phosphatase type IVA 1

    See identical proteins and their annotated locations for XP_009638361.1

    UniProtKB/TrEMBL
    A0A091IRD2, A0A091JB02
    Conserved Domains (1) summary
    cd18537
    Location:1 → 167
    PTP-IVa1; protein tyrosine phosphatase type IVA 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.