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PPIL2 peptidylprolyl isomerase like 2 [ Egretta garzetta (little egret) ]

Gene ID: 104127222, updated on 12-Mar-2024

Summary

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Gene symbol
PPIL2
Gene description
peptidylprolyl isomerase like 2
Locus tag
Z169_05495
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Ardeidae; Egretta
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259800.1 (3922078..3996372)

NW_009259800.1Genomic Context describing neighboring genes Neighboring gene protein HIRA Neighboring gene mitochondrial ribosomal protein L40 Neighboring gene yippee like 1 Neighboring gene mitogen-activated protein kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259800 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptidyl-prolyl cis-trans isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-ubiquitin ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein peptidyl-prolyl isomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING-type E3 ubiquitin-protein ligase PPIL2
Names
Peptidyl-prolyl cis-trans isomerase-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259800.1 Reference ASM68718v1 Primary Assembly

    Range
    3922078..3996372
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009639877.2 → XP_009638172.1  RING-type E3 ubiquitin-protein ligase PPIL2

    UniProtKB/TrEMBL
    A0A091JAS9
    Conserved Domains (3) summary
    smart00504
    Location:30 → 89
    Ubox; Modified RING finger domain
    cd01923
    Location:269 → 428
    cyclophilin_RING; cyclophilin_RING: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a modified RING finger domain. This group includes the nuclear proteins, Human hCyP-60 and Caenorhabditis elegans MOG-6 which, compared to the archetypal ...
    pfam06936
    Location:427 → 507
    Selenoprotein_S; Selenoprotein S (SelS)
Nucleotide Protein
Heading Accession and Version

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