U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ASPN asporin [ Egretta garzetta (little egret) ]

Gene ID: 104124322, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ASPN
Gene description
asporin
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ASPN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259328.1 (3307869..3317045, complement)

NW_009259328.1Genomic Context describing neighboring genes Neighboring gene osteoglycin Neighboring gene osteomodulin Neighboring gene extracellular matrix protein 2 Neighboring gene inositol-pentakisphosphate 2-kinase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_009259328 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
asporin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259328.1 Reference ASM68718v1 Primary Assembly

    Range
    3307869..3317045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009636647.1 → XP_009634942.1  asporin

    Conserved Domains (4) summary
    smart00013
    Location:67 → 96
    LRRNT; Leucine rich repeat N-terminal domain
    cd00116
    Location:75 → 295
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:75 → 95
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:97 → 154
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.