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HS2ST1 heparan sulfate 2-O-sulfotransferase 1 [ Egretta garzetta (little egret) ]

Gene ID: 104122914, updated on 12-Mar-2024

Summary

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Gene symbol
HS2ST1
Gene description
heparan sulfate 2-O-sulfotransferase 1
Locus tag
Z169_10430
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259047.1 (887672..909915, complement)

NW_009259047.1Genomic Context describing neighboring genes Neighboring gene protein kinase N2 Neighboring gene LIM domain only 4 Neighboring gene selenoprotein F Neighboring gene SH3 domain containing GRB2 like, endophilin B1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259047 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 2-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate 2-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259047.1 Reference ASM68718v1 Primary Assembly

    Range
    887672..909915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009635102.2 → XP_009633397.1  heparan sulfate 2-O-sulfotransferase 1

    UniProtKB/TrEMBL
    A0A091IZ44
    Conserved Domains (1) summary
    pfam03567
    Location:33 → 288
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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