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BANK1 B cell scaffold protein with ankyrin repeats 1 [ Egretta garzetta (little egret) ]

Gene ID: 104122598, updated on 12-Mar-2024

Summary

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Gene symbol
BANK1
Gene description
B cell scaffold protein with ankyrin repeats 1
Locus tag
Z169_14861
Gene type
protein coding
RefSeq status
MODEL
Organism
Egretta garzetta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Ardeidae; Egretta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ASM68718v1 (GCF_000687185.1) Unplaced Scaffold NW_009259032.1 (160127..346598, complement)

NW_009259032.1Genomic Context describing neighboring genes Neighboring gene nuclear factor kappa B subunit 1 Neighboring gene solute carrier family 39 member 8 Neighboring gene protein phosphatase 3 catalytic subunit alpha Neighboring gene endomucin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009259032 Unplaced Scaffold Reference ASM68718v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in B cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of B cell activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: B-cell scaffold protein with ankyrin repeats

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Egretta garzetta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68718v1 Primary Assembly

Genomic

  1. NW_009259032.1 Reference ASM68718v1 Primary Assembly

    Range
    160127..346598 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035890347.1 → XP_035746240.1  LOW QUALITY PROTEIN: B-cell scaffold protein with ankyrin repeats

    Conserved Domains (2) summary
    pfam14545
    Location:257 → 391
    DBB; Dof, BCAP, and BANK (DBB) motif,
    pfam18567
    Location:66 → 192
    TIR_3; Toll/interleukin-1 receptor domain
Nucleotide Protein
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