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KATNB1 katanin regulatory subunit B1 [ Fulmarus glacialis (Northern fulmar) ]

Gene ID: 104084078, updated on 12-Mar-2024

Summary

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Gene symbol
KATNB1
Gene description
katanin regulatory subunit B1
Locus tag
N327_12064
Gene type
protein coding
RefSeq status
MODEL
Organism
Fulmarus glacialis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Procellariiformes; Procellariidae; Fulmarus
Orthologs
human mouse all
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Genomic context

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See KATNB1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM69083v1 (GCF_000690835.1) Unplaced Scaffold NW_009194557.1 (35..16996)

NW_009194557.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009194557.1 Unplaced Scaffold Reference ASM69083v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule severing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of katanin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
katanin p80 WD40 repeat-containing subunit B1
Names
Katanin p80 WD40 repeat-containing subunit B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fulmarus glacialis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69083v1

Genomic

  1. NW_009194557.1 Reference ASM69083v1

    Range
    35..16996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009587793.1 → XP_009586088.1  katanin p80 WD40 repeat-containing subunit B1 isoform X1

    UniProtKB/TrEMBL
    A0A093IHT2
    Conserved Domains (4) summary
    COG2319
    Location:12 → 263
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:7 → 257
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam13925
    Location:500 → 651
    Katanin_con80; con80 domain of Katanin
    sd00039
    Location:67 → 103
    7WD40; WD40 repeat [structural motif]

  2. XM_009587795.1 → XP_009586090.1  katanin p80 WD40 repeat-containing subunit B1 isoform X3

    UniProtKB/TrEMBL
    A0A093IHT2
    Conserved Domains (4) summary
    COG2319
    Location:12 → 263
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:7 → 257
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam13925
    Location:497 → 648
    Katanin_con80; con80 domain of Katanin
    sd00039
    Location:67 → 103
    7WD40; WD40 repeat [structural motif]

  3. XM_009587794.1 → XP_009586089.1  katanin p80 WD40 repeat-containing subunit B1 isoform X2

    UniProtKB/TrEMBL
    A0A093IHT2
    Conserved Domains (4) summary
    COG2319
    Location:12 → 263
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:7 → 257
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam13925
    Location:499 → 650
    Katanin_con80; con80 domain of Katanin
    sd00039
    Location:67 → 103
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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