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RIMBP2 RIMS binding protein 2 [ Fulmarus glacialis (Northern fulmar) ]

Gene ID: 104081672, updated on 12-Mar-2024

Summary

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Gene symbol
RIMBP2
Gene description
RIMS binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Fulmarus glacialis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Procellariiformes; Procellariidae; Fulmarus
Orthologs
human mouse all
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Genomic context

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See RIMBP2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ASM69083v1 (GCF_000690835.1) Unplaced Scaffold NW_009231294.1 (25847..174611, complement)

NW_009231294.1Genomic Context describing neighboring genes Neighboring gene piwi like RNA-mediated gene silencing 1 Neighboring gene syntaxin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009231294.1 Unplaced Scaffold Reference ASM69083v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RIMS-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fulmarus glacialis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69083v1

Genomic

  1. NW_009231294.1 Reference ASM69083v1

    Range
    25847..174611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009584507.1 → XP_009582802.1  RIMS-binding protein 2 isoform X1

    See identical proteins and their annotated locations for XP_009582802.1

    UniProtKB/TrEMBL
    A0A093JAF3
    Conserved Domains (7) summary
    cd12012
    Location:1125 → 1186
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:1229 → 1289
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:190 → 250
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:505 → 599
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02794
    Location:2 → 60
    tolA_full; TolA protein
    pfam00041
    Location:411 → 474
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)

  2. XM_009584509.1 → XP_009582804.1  RIMS-binding protein 2 isoform X3

    Conserved Domains (6) summary
    cd12012
    Location:864 → 925
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:968 → 1028
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:173 → 233
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:488 → 582
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:394 → 457
    fn3; Fibronectin type III domain
    pfam06005
    Location:10 → 64
    DUF904; Protein of unknown function (DUF904)

  3. XM_009584508.1 → XP_009582803.1  RIMS-binding protein 2 isoform X2

    Conserved Domains (7) summary
    cd12012
    Location:881 → 942
    SH3_RIM-BP_2; Second Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12013
    Location:985 → 1045
    SH3_RIM-BP_3; Third Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd12014
    Location:190 → 250
    SH3_RIM-BP_1; First Src homology 3 domain of Rab3-interacting molecules (RIMs) binding proteins
    cd00063
    Location:505 → 599
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    TIGR02794
    Location:2 → 60
    tolA_full; TolA protein
    pfam00041
    Location:411 → 474
    fn3; Fibronectin type III domain
    pfam13863
    Location:24 → 85
    DUF4200; Domain of unknown function (DUF4200)
Nucleotide Protein
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