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PDZD8 PDZ domain containing 8 [ Fulmarus glacialis (Northern fulmar) ]

Gene ID: 104069152, updated on 11-Apr-2024

Summary

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Gene symbol
PDZD8
Gene description
PDZ domain containing 8
Locus tag
N327_09725
Gene type
protein coding
RefSeq status
MODEL
Organism
Fulmarus glacialis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Procellariiformes; Procellariidae; Fulmarus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See PDZD8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM69083v1 (GCF_000690835.1) Unplaced Scaffold NW_009204407.1 (35532..40696, complement)

NW_009204407.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 18 member A2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009204407.1 Unplaced Scaffold Reference ASM69083v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrion-endoplasmic reticulum membrane tethering IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondria-associated endoplasmic reticulum membrane contact site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PDZ domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fulmarus glacialis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69083v1

Genomic

  1. NW_009204407.1 Reference ASM69083v1

    Range
    35532..40696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009574981.1 → XP_009573276.1  PDZ domain-containing protein 8

    Conserved Domains (2) summary
    cd00989
    Location:28 → 81
    PDZ_metalloprotease; PDZ domain of bacterial and plant zinc metalloprotases, presumably membrane-associated or integral membrane proteases, which may be involved in signalling and regulatory mechanisms. May be responsible for substrate recognition and/or binding, as most PDZ ...
    pfam00130
    Location:471 → 513
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
Nucleotide Protein
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