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SMTNL2 smoothelin like 2 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104064679, updated on 12-Mar-2024

Summary

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Gene symbol
SMTNL2
Gene description
smoothelin like 2
Locus tag
N303_12607
See related
EnsemblRapid:ENSCCOG00010006681
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 20 NC_071420.1 (10718346..10757416)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009246130.1 (1510220..1545124)

Chromosome 20 - NC_071420.1Genomic Context describing neighboring genes Neighboring gene S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 Neighboring gene SBDS ribosome maturation factor Neighboring gene tektin 1 Neighboring gene F-box protein 39

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tropomyosin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of vasoconstriction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in I band IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in M band IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of filamentous actin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule organizing center IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
smoothelin-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071420.1 Reference bCucCan1.pri

    Range
    10718346..10757416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054085294.1 → XP_053941269.1  smoothelin-like protein 2 isoform X2

  2. XM_054085293.1 → XP_053941268.1  smoothelin-like protein 2 isoform X1

    Related
    ENSCCOP00010010044.1, ENSCCOT00010011839.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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