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PCDH17 protocadherin 17 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104063523, updated on 12-Mar-2024

Summary

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Gene symbol
PCDH17
Gene description
protocadherin 17
Locus tag
N303_10569
See related
EnsemblRapid:ENSCCOG00010000487
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See PCDH17 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 1 NC_071401.1 (35172836..35265853)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009245947.1 (783212..868624)

Chromosome 1 - NC_071401.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128851013 Neighboring gene uncharacterized LOC128851006 Neighboring gene uncharacterized LOC128853823 Neighboring gene uncharacterized LOC128853820

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protocadherin-17
Names
Protocadherin-17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071401.1 Reference bCucCan1.pri

    Range
    35172836..35265853
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054074596.1 → XP_053930571.1  protocadherin-17 isoform X1

  2. XM_054074625.1 → XP_053930600.1  protocadherin-17 isoform X3

  3. XM_054074616.1 → XP_053930591.1  protocadherin-17 isoform X2

  4. XM_054074605.1 → XP_053930580.1  protocadherin-17 isoform X1

  5. XM_054074608.1 → XP_053930583.1  protocadherin-17 isoform X1

    Related
    ENSCCOP00010000645.1, ENSCCOT00010000825.1

  6. XM_054074633.1 → XP_053930608.1  protocadherin-17 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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