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TET2 tet methylcytosine dioxygenase 2 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104062873, updated on 12-Mar-2024

Summary

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Gene symbol
TET2
Gene description
tet methylcytosine dioxygenase 2
Locus tag
N303_01872
See related
EnsemblRapid:ENSCCOG00010015659
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 4 NC_071404.1 (54481065..54555628)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009245772.1 (2876680..2906823, complement)

Chromosome 4 - NC_071404.1Genomic Context describing neighboring genes Neighboring gene CXXC finger protein 4 Neighboring gene uncharacterized LOC128852099 Neighboring gene inorganic pyrophosphatase 2 Neighboring gene Rho guanine nucleotide exchange factor 38

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5-methylcytosine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 5-methylcytosine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myeloid cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oxidative demethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylcytosine dioxygenase TET2
Names
Methylcytosine dioxygenase TET2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071404.1 Reference bCucCan1.pri

    Range
    54481065..54555628
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054064913.1 → XP_053920888.1  methylcytosine dioxygenase TET2

    Related
    ENSCCOP00010022737.1, ENSCCOT00010027683.1
Nucleotide Protein
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