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PDIK1L PDLIM1 interacting kinase 1 like [ Cuculus canorus (common cuckoo) ]

Gene ID: 104061506, updated on 3-Apr-2024

Summary

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Gene symbol
PDIK1L
Gene description
PDLIM1 interacting kinase 1 like
Locus tag
N303_15105
See related
EnsemblRapid:ENSCCOG00010004664
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See PDIK1L in Genome Data Viewer
Location:
chromosome: 22
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 22 NC_071422.1 (4201462..4216328, complement)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009245496.1 (667920..671657)

Chromosome 22 - NC_071422.1Genomic Context describing neighboring genes Neighboring gene chromosome 22 C1orf232 homolog Neighboring gene family with sequence similarity 110 member D Neighboring gene tripartite motif containing 63 Neighboring gene solute carrier family 30 member 2 Neighboring gene exostosin like glycosyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein autophosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase PDIK1L
Names
Serine/threonine-protein kinase PDIK1L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071422.1 Reference bCucCan1.pri

    Range
    4201462..4216328 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054086477.1 → XP_053942452.1  serine/threonine-protein kinase PDIK1L isoform X2

  2. XM_054086476.1 → XP_053942451.1  serine/threonine-protein kinase PDIK1L isoform X1

  3. XM_054086475.1 → XP_053942450.1  serine/threonine-protein kinase PDIK1L isoform X1

  4. XM_009563453.2 → XP_009561748.1  serine/threonine-protein kinase PDIK1L isoform X1

    UniProtKB/TrEMBL
    A0A091GA57
    Related
    ENSCCOP00010006968.1, ENSCCOT00010008152.1
    Conserved Domains (2) summary
    smart00220
    Location:8 → 325
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd13977
    Location:7 → 330
    STKc_PDIK1L; Catalytic domain of the Serine/Threonine kinase, PDLIM1 interacting kinase 1 like
Nucleotide Protein
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