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BCDIN3D BCDIN3 domain containing RNA methyltransferase [ Cuculus canorus (common cuckoo) ]

Gene ID: 104055119, updated on 12-Mar-2024

Summary

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Gene symbol
BCDIN3D
Gene description
BCDIN3 domain containing RNA methyltransferase
Locus tag
N303_01301
See related
EnsemblRapid:ENSCCOG00010015727
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 29
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 29 NC_071429.1 (744717..774445)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009244210.1 (77983..84860)

Chromosome 29 - NC_071429.1Genomic Context describing neighboring genes Neighboring gene aquaporin-2 Neighboring gene Fas apoptotic inhibitory molecule 2 Neighboring gene keratin, type II cytoskeletal 80 Neighboring gene keratin, type II cytoskeletal cochleal Neighboring gene keratin, type II cuticular Hb4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in miRNA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of pre-miRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA 5'-monophosphate methyltransferase
Names
Pre-miRNA 5'-monophosphate methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071429.1 Reference bCucCan1.pri

    Range
    744717..774445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054051413.1 → XP_053907388.1  RNA 5'-monophosphate methyltransferase

    Related
    ENSCCOP00010022852.1, ENSCCOT00010027798.1

RNA

  1. XR_008447401.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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