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TMTC2 transmembrane O-mannosyltransferase targeting cadherins 2 [ Cuculus canorus (common cuckoo) ]

Gene ID: 104054977, updated on 12-Mar-2024

Summary

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Gene symbol
TMTC2
Gene description
transmembrane O-mannosyltransferase targeting cadherins 2
Locus tag
N303_10420
See related
EnsemblRapid:ENSCCOG00010019740
Gene type
protein coding
RefSeq status
MODEL
Organism
Cuculus canorus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Cuculiformes; Cuculidae; Cuculus
Orthologs
human mouse all
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Genomic context

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See TMTC2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current bCucCan1.pri (GCF_017976375.1) 1 NC_071401.1 (164145320..164396856)
100 previous assembly ASM70932v1 (GCF_000709325.1) Unplaced Scaffold NW_009244089.1 (207399..464983)

Chromosome 1 - NC_071401.1Genomic Context describing neighboring genes Neighboring gene PTPRF interacting protein alpha 2 Neighboring gene methyltransferase like 25 Neighboring gene coiled-coil domain containing 59 Neighboring gene cuticle protein 16.5-like Neighboring gene solute carrier family 6 member 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC2
Names
Transmembrane and TPR repeat-containing protein 2
transmembrane and tetratricopeptide repeat containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_017976375.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCucCan1.pri

Genomic

  1. NC_071401.1 Reference bCucCan1.pri

    Range
    164145320..164396856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054079749.1 → XP_053935724.1  protein O-mannosyl-transferase TMTC2 isoform X1

    Related
    ENSCCOP00010028024.1, ENSCCOT00010034832.1

  2. XM_054079756.1 → XP_053935731.1  protein O-mannosyl-transferase TMTC2 isoform X2

    Related
    ENSCCOP00010028008.1, ENSCCOT00010034813.1
Nucleotide Protein
Heading Accession and Version

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