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HEATR1 HEAT repeat containing 1 [ Phalacrocorax carbo (great cormorant) ]

Gene ID: 104046696, updated on 16-Apr-2024

Summary

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Gene symbol
HEATR1
Gene description
HEAT repeat containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Phalacrocorax carbo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Suliformes; Phalacrocoracidae; Phalacrocorax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
45
Annotation release Status Assembly Chr Location
RS_2024_04 current bPhaCar2.1 (GCF_963921805.1) 3 NC_087515.1 (7156731..7197747, complement)
100 previous assembly ASM70892v1 (GCF_000708925.1) Unplaced Scaffold NW_009156003.1 (1974..40666)

Chromosome 3 - NC_087515.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135312437 Neighboring gene EDAR associated via death domain Neighboring gene galectin 8 Neighboring gene actinin alpha 2 Neighboring gene 5-methyltetrahydrofolate-homocysteine methyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables snoRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase I IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of t-UTP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
HEAT repeat-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963921805.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bPhaCar2.1

Genomic

  1. NC_087515.1 Reference bPhaCar2.1

    Range
    7156731..7197747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064445754.1 → XP_064301824.1  HEAT repeat-containing protein 1

Nucleotide Protein
Heading Accession and Version

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