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HEPH hephaestin [ Phalacrocorax carbo (great cormorant) ]

Gene ID: 104043372, updated on 19-Apr-2024

Summary

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Gene symbol
HEPH
Gene description
hephaestin
Locus tag
N336_03904
Gene type
protein coding
RefSeq status
MODEL
Organism
Phalacrocorax carbo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Suliformes; Phalacrocoracidae; Phalacrocorax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_04 current bPhaCar2.1 (GCF_963921805.1) 11 NC_087523.1 (716008..742522)
100 previous assembly ASM70892v1 (GCF_000708925.1) Unplaced Scaffold NW_009142970.1 (3230..25143)

Chromosome 11 - NC_087523.1Genomic Context describing neighboring genes Neighboring gene V-set and immunoglobulin domain-containing protein 4-like Neighboring gene heat shock factor protein 3-like Neighboring gene G-protein coupled receptor 83 Neighboring gene uncharacterized LOC135315316

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hephaestin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963921805.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bPhaCar2.1

Genomic

  1. NC_087523.1 Reference bPhaCar2.1

    Range
    716008..742522
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064462763.1 → XP_064318833.1  hephaestin isoform X2

  2. XM_064462762.1 → XP_064318832.1  hephaestin isoform X1

  3. XM_064462761.1 → XP_064318831.1  hephaestin isoform X1

  4. XM_064462764.1 → XP_064318834.1  hephaestin isoform X3

Nucleotide Protein
Heading Accession and Version

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