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PCDH18 protocadherin 18 [ Phalacrocorax carbo (great cormorant) ]

Gene ID: 104039980, updated on 19-Apr-2024

Summary

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Gene symbol
PCDH18
Gene description
protocadherin 18
Locus tag
N336_06645
Gene type
protein coding
RefSeq status
MODEL
Organism
Phalacrocorax carbo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Suliformes; Phalacrocoracidae; Phalacrocorax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current bPhaCar2.1 (GCF_963921805.1) 4 NC_087516.1 (71166504..71176291)
100 previous assembly ASM70892v1 (GCF_000708925.1) Unplaced Scaffold NW_009172890.1 (23768..32841, complement)

Chromosome 4 - NC_087516.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 7 member 11 Neighboring gene uncharacterized LOC135313167 Neighboring gene uncharacterized LOC135313289 Neighboring gene uncharacterized LOC135313168

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protocadherin-18
Names
Protocadherin-18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963921805.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bPhaCar2.1

Genomic

  1. NC_087516.1 Reference bPhaCar2.1

    Range
    71166504..71176291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009512009.2 → XP_009510304.2  protocadherin-18 isoform X1

  2. XM_009512010.2 → XP_009510305.2  protocadherin-18 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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