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NPM1 nucleophosmin 1 [ Pelecanus crispus (Dalmatian pelican) ]

Gene ID: 104034116, updated on 12-Mar-2024

Summary

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Gene symbol
NPM1
Gene description
nucleophosmin 1
Locus tag
N334_12287
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelecanus crispus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Pelecanidae; Pelecanus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM68737v1 (GCF_000687375.1) Unplaced Scaffold NW_009098393.1 (13424..26622, complement)

NW_009098393.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009098393.1 Unplaced Scaffold Reference ASM68737v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of centrosome duplication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleophosmin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelecanus crispus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68737v1

Genomic

  1. NW_009098393.1 Reference ASM68737v1

    Range
    13424..26622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009487013.1 → XP_009485288.1  nucleophosmin

    UniProtKB/TrEMBL
    A0A091SZ22
    Conserved Domains (2) summary
    pfam03066
    Location:8 → 110
    Nucleoplasmin; Nucleoplasmin
    pfam16276
    Location:234 → 282
    NPM1-C; Nucleophosmin C-terminal domain
Nucleotide Protein
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