U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RNF170 ring finger protein 170 [ Pelecanus crispus (Dalmatian pelican) ]

Gene ID: 104025864, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
RNF170
Gene description
ring finger protein 170
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelecanus crispus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Pelecanidae; Pelecanus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RNF170 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM68737v1 (GCF_000687375.1) Unplaced Scaffold NW_009087574.1 (29829..49092, complement)

NW_009087574.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_009087574.1 Unplaced Scaffold Reference ASM68737v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase RNF170

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pelecanus crispus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68737v1

Genomic

  1. NW_009087574.1 Reference ASM68737v1

    Range
    29829..49092 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009483582.1 → XP_009481857.1  E3 ubiquitin-protein ligase RNF170 isoform X2

    Conserved Domains (2) summary
    cd00162
    Location:87 → 133
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    pfam06803
    Location:212 → 237
    DUF1232; Protein of unknown function (DUF1232)

  2. XM_009483583.1 → XP_009481858.1  E3 ubiquitin-protein ligase RNF170 isoform X3

    See identical proteins and their annotated locations for XP_009481858.1

    Conserved Domains (2) summary
    cd16553
    Location:3 → 46
    RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins
    pfam06803
    Location:128 → 153
    DUF1232; Protein of unknown function (DUF1232)

  3. XM_009483581.1 → XP_009481856.1  E3 ubiquitin-protein ligase RNF170 isoform X1

    Conserved Domains (2) summary
    cd00162
    Location:88 → 134
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    pfam06803
    Location:213 → 238
    DUF1232; Protein of unknown function (DUF1232)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.