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VASN vasorin [ Nipponia nippon (crested ibis) ]

Gene ID: 104023513, updated on 12-Mar-2024

Summary

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Gene symbol
VASN
Gene description
vasorin
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_008999126.1 (5513560..5519302)

NW_008999126.1Genomic Context describing neighboring genes Neighboring gene coronin-7-like Neighboring gene GLIS family zinc finger 2 Neighboring gene DnaJ heat shock protein family (Hsp40) member A3 Neighboring gene NmrA like redox sensor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008999126.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vasorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_008999126.1 Reference ASM70822v1 Primary Assembly

    Range
    5513560..5519302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009477344.1 → XP_009475619.1  vasorin

    Conserved Domains (5) summary
    sd00033
    Location:122 → 145
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:438 → 512
    fn3; Fibronectin type III domain
    pfam12799
    Location:144 → 185
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:168 → 228
    LRR_8; Leucine rich repeat
    cl15307
    Location:366 → 397
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
Heading Accession and Version

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