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AFAP1L1 actin filament associated protein 1 like 1 [ Nipponia nippon (crested ibis) ]

Gene ID: 104019023, updated on 12-Mar-2024

Summary

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Gene symbol
AFAP1L1
Gene description
actin filament associated protein 1 like 1
Locus tag
Y956_04334
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009002439.1 (2375123..2387521)

NW_009002439.1Genomic Context describing neighboring genes Neighboring gene SH3 domain and tetratricopeptide repeats 2 Neighboring gene actin binding LIM protein family member 3 Neighboring gene GrpE like 2, mitochondrial Neighboring gene prenylcysteine oxidase 1 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009002439.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
actin filament-associated protein 1-like 1
Names
Actin filament-associated protein 1-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009002439.1 Reference ASM70822v1 Primary Assembly

    Range
    2375123..2387521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009472239.1 → XP_009470514.1  actin filament-associated protein 1-like 1

    Conserved Domains (3) summary
    cd13306
    Location:256 → 362
    PH1_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 1
    cd13307
    Location:462 → 562
    PH2_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2
    pfam00169
    Location:272 → 361
    PH; PH domain
Nucleotide Protein
Heading Accession and Version

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