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SLC6A9 solute carrier family 6 member 9 [ Nipponia nippon (crested ibis) ]

Gene ID: 104015427, updated on 12-Mar-2024

Summary

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Gene symbol
SLC6A9
Gene description
solute carrier family 6 member 9
Locus tag
Y956_13934
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009001455.1 (2148824..2162785)

NW_009001455.1Genomic Context describing neighboring genes Neighboring gene DNA methyltransferase 1 associated protein 1 Neighboring gene Krueppel-like factor 2 Neighboring gene vegetative cell wall protein gp1 Neighboring gene beta-1,4-galactosyltransferase 2 Neighboring gene ATPase H+ transporting V0 subunit b Neighboring gene diphthamide biosynthesis 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009001455.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycine:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glycinergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium- and chloride-dependent glycine transporter 1
Names
Sodium- and chloride-dependent glycine transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009001455.1 Reference ASM70822v1 Primary Assembly

    Range
    2148824..2162785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009468169.1 → XP_009466444.1  sodium- and chloride-dependent glycine transporter 1 isoform X2

    Conserved Domains (1) summary
    cd11498
    Location:11 → 588
    SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain

  2. XM_009468168.1 → XP_009466443.1  sodium- and chloride-dependent glycine transporter 1 isoform X1

    Conserved Domains (1) summary
    cd11498
    Location:30 → 607
    SLC6sbd_GlyT1; Na(+)- and Cl(-)-dependent glycine transporter GlyT1; solute-binding domain
Nucleotide Protein
Heading Accession and Version

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