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SPAG6 sperm associated antigen 6 [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103922471, updated on 11-Mar-2024

Summary

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Gene symbol
SPAG6
Gene description
sperm associated antigen 6
Locus tag
AS28_06658
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Pygoscelis
Orthologs
human mouse all
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Genomic context

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See SPAG6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008825410.1 (8454139..8482571)

NW_008825410.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 3 Neighboring gene BMI1 proto-oncogene, polycomb ring finger Neighboring gene phosphatidylinositol-5-phosphate 4-kinase type 2 alpha Neighboring gene armadillo repeat containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008825410.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in epithelial cilium movement involved in extracellular fluid movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in filopodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection extension IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sperm axoneme assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm principal piece IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sperm-associated antigen 6
Names
Sperm-associated antigen 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008825410.1 Reference ASM69910v1 Primary Assembly

    Range
    8454139..8482571
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009330612.1 → XP_009328887.1  sperm-associated antigen 6

    UniProtKB/TrEMBL
    A0A093P453
    Conserved Domains (3) summary
    cd00020
    Location:99 → 217
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00044
    Location:65 → 89
    HEAT; HEAT repeat [structural motif]
    sd00043
    Location:100 → 132
    ARM; armadillo repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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