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RREB1 ras responsive element binding protein 1 [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103919021, updated on 11-Mar-2024

Summary

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Gene symbol
RREB1
Gene description
ras responsive element binding protein 1
Locus tag
AS28_04271
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Pygoscelis
Orthologs
human mouse all
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Genomic context

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See RREB1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008825071.1 (3215073..3288438)

NW_008825071.1Genomic Context describing neighboring genes Neighboring gene coagulation factor XIII A chain Neighboring gene lymphocyte antigen 86 Neighboring gene signal sequence receptor subunit 1 Neighboring gene RIO kinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008825071.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-responsive element-binding protein 1
Names
Ras-responsive element-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008825071.1 Reference ASM69910v1 Primary Assembly

    Range
    3215073..3288438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009326465.1 → XP_009324740.1  ras-responsive element-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A093NXA7
    Conserved Domains (3) summary
    sd00017
    Location:49 → 69
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:1435 → 1459
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:186 → 242
    zf-C2H2_8; C2H2-type zinc ribbon

  2. XM_009326464.1 → XP_009324739.1  ras-responsive element-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A093NXA7
    Conserved Domains (3) summary
    sd00017
    Location:79 → 99
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:1465 → 1489
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:216 → 272
    zf-C2H2_8; C2H2-type zinc ribbon

  3. XM_009326466.1 → XP_009324741.1  ras-responsive element-binding protein 1 isoform X3

    Conserved Domains (4) summary
    sd00017
    Location:79 → 99
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:108 → 130
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:122 → 147
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:216 → 272
    zf-C2H2_8; C2H2-type zinc ribbon
Nucleotide Protein
Heading Accession and Version

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