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EED embryonic ectoderm development [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103916486, updated on 11-Mar-2024

Summary

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Gene symbol
EED
Gene description
embryonic ectoderm development
Locus tag
AS28_14404
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Pygoscelis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008824754.1 (2211061..2225666)

NW_008824754.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 83 Neighboring gene phosphatidylinositol binding clathrin assembly protein Neighboring gene heat shock protein nuclear import factor hikeshi Neighboring gene taste receptor type 2 member 10-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008824754.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESC/E(Z) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycomb protein EED
Names
Polycomb protein EED

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008824754.1 Reference ASM69910v1 Primary Assembly

    Range
    2211061..2225666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009323479.1 → XP_009321754.1  polycomb protein EED

    Conserved Domains (3) summary
    COG2319
    Location:46 → 407
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:63 → 107
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:117 → 405
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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