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LIMA1 LIM domain and actin binding 1 [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103914611, updated on 11-Mar-2024

Summary

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Gene symbol
LIMA1
Gene description
LIM domain and actin binding 1
Locus tag
AS28_00358
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Pygoscelis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008823952.1 (49432..73202, complement)

NW_008823952.1Genomic Context describing neighboring genes Neighboring gene glycerol-3-phosphate dehydrogenase 1 Neighboring gene ceramide synthase 5 Neighboring gene uncharacterized LOC103914619 Neighboring gene La ribonucleoprotein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008823952.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament bundle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM domain and actin-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008823952.1 Reference ASM69910v1 Primary Assembly

    Range
    49432..73202 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009321284.1 → XP_009319559.1  LIM domain and actin-binding protein 1

    Conserved Domains (2) summary
    cd09485
    Location:402 → 454
    LIM_Eplin_alpha_beta; The Lim domain of Epithelial Protein Lost in Neoplasm (Eplin)
    pfam06136
    Location:114 → 265
    DUF966; Domain of unknown function (DUF966)
Nucleotide Protein
Heading Accession and Version

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