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BATF basic leucine zipper ATF-like transcription factor [ Pygoscelis adeliae (Adelie penguin) ]

Gene ID: 103912967, updated on 11-Mar-2024

Summary

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Gene symbol
BATF
Gene description
basic leucine zipper ATF-like transcription factor
Locus tag
AS28_13559
Gene type
protein coding
RefSeq status
MODEL
Organism
Pygoscelis adeliae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Pygoscelis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008824356.1 (5459758..5464834)

NW_008824356.1Genomic Context describing neighboring genes Neighboring gene Fos proto-oncogene, AP-1 transcription factor subunit Neighboring gene Jun dimerization protein 2 Neighboring gene FLVCR choline and putative heme transporter 2 Neighboring gene ergosterol biosynthesis 28 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008824356.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic leucine zipper transcriptional factor ATF-like
Names
Basic leucine zipper transcriptional factor ATF-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69910v1 Primary Assembly

Genomic

  1. NW_008824356.1 Reference ASM69910v1 Primary Assembly

    Range
    5459758..5464834
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009319397.1 → XP_009317672.1  basic leucine zipper transcriptional factor ATF-like

    See identical proteins and their annotated locations for XP_009317672.1

    Conserved Domains (2) summary
    cd14686
    Location:29 → 83
    bZIP; coiled coil [structural motif]
    cl21462
    Location:27 → 83
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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