These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001144944.1 → NP_001138416.1 myosin regulatory light chain 12B
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1-3 all encode the same protein.
- Source sequence(s)
-
BG696903, CA307094
- Consensus CDS
-
CCDS11831.1
- UniProtKB/Swiss-Prot
-
O14950
- Related
- ENSP00000383037, OTTHUMP00000165807, ENST00000400175, OTTHUMT00000258909
- Conserved Domains (2) summary
-
- cd00051
Location:33 – 90
Blast Score: 99
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
- COG5126
Location:14 – 169
Blast Score: 297
- FRQ1; Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
-
NM_001144945.1 → NP_001138417.1 myosin regulatory light chain 12B
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1. Variants 1-3 all encode the same protein.
- Source sequence(s)
-
AP005329, CA307094, CN302451
- Consensus CDS
-
CCDS11831.1
- UniProtKB/Swiss-Prot
-
O14950
- Conserved Domains (2) summary
-
- cd00051
Location:33 – 90
Blast Score: 99
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
- COG5126
Location:14 – 169
Blast Score: 297
- FRQ1; Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
-
NM_033546.3 → NP_291024.1 myosin regulatory light chain 12B
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1-3 all encode the same protein.
- Source sequence(s)
-
AP005329, BG703257, CA307094
- Consensus CDS
-
CCDS11831.1
- UniProtKB/Swiss-Prot
-
O14950
- Related
- ENSP00000237500, OTTHUMP00000162244, ENST00000237500, OTTHUMT00000254365
- Conserved Domains (2) summary
-
- cd00051
Location:33 – 90
Blast Score: 99
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
- COG5126
Location:14 – 169
Blast Score: 297
- FRQ1; Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000018.9 Reference GRCh37.p5 Primary Assembly
- Range
- 3262111..3278282
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000150.1 Alternate HuRef
- Range
- 3226523..3243194
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the cited
reason(s). Suppressed RefSeqs do not appear in BLAST databases, related sequence links,
or BLAST links (BLink), but may still be retrieved by clicking on their
accession.version below.
-
NM_001144946.1: Suppressed sequence
- Description
- NM_001144946.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript, which aligns to the reference genome with poorly supported non-consensus splice sites.