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PLA2G6 phospholipase A2 group VI [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103907745, updated on 11-Mar-2024

Summary

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Gene symbol
PLA2G6
Gene description
phospholipase A2 group VI
Locus tag
AS27_07866
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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See PLA2G6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008794445.1 (1932645..1949051, complement)

NW_008794445.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 8 Neighboring gene BAR/IMD domain containing adaptor protein 2 like 2 Neighboring gene MAF bZIP transcription factor F Neighboring gene transmembrane protein 184B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008794445.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-independent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
85/88 kDa calcium-independent phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008794445.1 Reference ASM69914v1

    Range
    1932645..1949051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009289974.2 → XP_009288249.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    Conserved Domains (4) summary
    cd07212
    Location:429 → 742
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:145 → 271
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:156 → 247
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]

  2. XM_009289973.2 → XP_009288248.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    See identical proteins and their annotated locations for XP_009288248.1

    UniProtKB/TrEMBL
    A0A087QLQ3
    Conserved Domains (4) summary
    cd07212
    Location:480 → 793
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    cd00204
    Location:145 → 271
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:156 → 247
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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