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SLC6A1 solute carrier family 6 member 1 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103905403, updated on 11-Mar-2024

Summary

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Gene symbol
SLC6A1
Gene description
solute carrier family 6 member 1
Locus tag
AS27_00382
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008796112.1 (979719..998023)

NW_008796112.1Genomic Context describing neighboring genes Neighboring gene ATPase plasma membrane Ca2+ transporting 2 Neighboring gene solute carrier family 6 member 11 Neighboring gene histamine receptor H1 Neighboring gene autophagy related 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008796112.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-aminobutyric acid:sodium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium- and chloride-dependent GABA transporter 1
Names
Sodium- and chloride-dependent GABA transporter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008796112.1 Reference ASM69914v1

    Range
    979719..998023
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009287051.1 → XP_009285326.1  sodium- and chloride-dependent GABA transporter 1

    See identical proteins and their annotated locations for XP_009285326.1

    UniProtKB/TrEMBL
    A0A087RH38
    Conserved Domains (1) summary
    cd11506
    Location:2 → 598
    SLC6sbd_GAT1; Na(+)- and Cl(-)-dependent GABA transporter 1; solute-binding domain
Nucleotide Protein
Heading Accession and Version

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