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ASB6 ankyrin repeat and SOCS box containing 6 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103905299, updated on 11-Mar-2024

Summary

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Gene symbol
ASB6
Gene description
ankyrin repeat and SOCS box containing 6
Locus tag
AS27_01589
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008796111.1 (1656136..1661002, complement)

NW_008796111.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2 phosphatase activator Neighboring gene N-terminal Xaa-Pro-Lys N-methyltransferase 1 Neighboring gene paired related homeobox 2 Neighboring gene prostaglandin E synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008796111.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BRCA1-BARD1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and SOCS box protein 6
Names
Ankyrin repeat and SOCS box protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008796111.1 Reference ASM69914v1

    Range
    1656136..1661002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009286916.2 → XP_009285191.1  ankyrin repeat and SOCS box protein 6

    UniProtKB/TrEMBL
    A0A087RGX3
    Conserved Domains (4) summary
    cd00204
    Location:104 → 218
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    cd03725
    Location:374 → 416
    SOCS_ASB6; SOCS (suppressors of cytokine signaling) box of ASB6-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. ASB6 interacts with the adaptor protein APS and recruits elongin B/C to the insulin receptor ...
    pfam12796
    Location:107 → 206
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:105 → 133
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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