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SNX2 sorting nexin 2 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103903026, updated on 11-Mar-2024

Summary

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Gene symbol
SNX2
Gene description
sorting nexin 2
Locus tag
AS27_13765
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008795885.1 (3145..31549)

NW_008795885.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 24 Neighboring gene peptidylprolyl isomerase C

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008795885.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in early endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of retromer complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-2
Names
Sorting nexin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008795885.1 Reference ASM69914v1

    Range
    3145..31549
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009284155.2 → XP_009282430.1  sorting nexin-2

    UniProtKB/TrEMBL
    A0A087RBI1
    Conserved Domains (3) summary
    cd07282
    Location:78 → 201
    PX_SNX2; The phosphoinositide binding Phox Homology domain of Sorting Nexin 2
    cd07664
    Location:219 → 452
    BAR_SNX2; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 2
    pfam03700
    Location:3 → 48
    Sorting_nexin; Sorting nexin, N-terminal domain
Nucleotide Protein
Heading Accession and Version

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