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ERI1 exoribonuclease 1 [ Aptenodytes forsteri (emperor penguin) ]

Gene ID: 103902267, updated on 11-Mar-2024

Summary

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Gene symbol
ERI1
Gene description
exoribonuclease 1
Locus tag
AS27_12809
Gene type
protein coding
RefSeq status
MODEL
Organism
Aptenodytes forsteri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Sphenisciformes; Spheniscidae; Aptenodytes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM69914v1 (GCF_000699145.1) Unplaced Scaffold NW_008795709.1 (471430..481641)

NW_008795709.1Genomic Context describing neighboring genes Neighboring gene tankyrase Neighboring gene multifunctional ROCO family signaling regulator 1 Neighboring gene protein phosphatase 1 regulatory subunit 3B Neighboring gene claudin 23

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008795709.1 Unplaced Scaffold Reference ASM69914v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3'-5' exoribonuclease 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aptenodytes forsteri Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69914v1

Genomic

  1. NW_008795709.1 Reference ASM69914v1

    Range
    471430..481641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009283294.2 → XP_009281569.1  3'-5' exoribonuclease 1 isoform X1

    UniProtKB/TrEMBL
    A0A087R9S0
    Conserved Domains (2) summary
    cd06133
    Location:99 → 279
    ERI-1_3'hExo_like; DEDDh 3'-5' exonuclease domain of Caenorhabditis elegans ERI-1, human 3' exonuclease, and similar proteins
    pfam02037
    Location:45 → 79
    SAP; SAP domain

  2. XM_009283295.2 → XP_009281570.1  3'-5' exoribonuclease 1 isoform X2

    UniProtKB/TrEMBL
    A0A087R9S0
    Conserved Domains (2) summary
    cd06133
    Location:52 → 232
    ERI-1_3'hExo_like; DEDDh 3'-5' exonuclease domain of Caenorhabditis elegans ERI-1, human 3' exonuclease, and similar proteins
    pfam02037
    Location:1 → 32
    SAP; SAP domain
Nucleotide Protein
Heading Accession and Version

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